1. Value-based metrics in Medical imaging - A quantitative analysis of current practices using a neural network-based scoring system for performance evaluation (RAD-Ops).
Conception, study design, protocol, project management.
Data collection, arrangement and analysis.
2. Best use Clinical applications for Machine Learning methodologies.
Conception, literature review and analysis.
Developing the Cancer Sharing (CanShare) Data Exchange Framework for Meaningful Research. (NIH-U01)
Conceptualization, study design, project management
Informatics support: cloud-based data exchange infrastructure
F-AraG (Visact) T-cell imaging for Immunotherapy response assessment in Head/Neck cancer (Stanford) and Bladder cancer (UCSF). (NIH-SBIR)
Clinical trial design (phases II/III), grant writing and protocol.
Study interpretation, Quantitative image analysis, Radiomics.
1. Machine learning-based predictive modeling for diagnostic imaging of infections
Study design, neural network modeling, and data analysis.
2. Machine learning-based predictive modeling for Infective Endocarditis in the setting of Staph aureus bacteremia
Study design, neural network modeling, and data analysis.
Clinical Context Generation for Imaging: A Design Thinking-based Analysis of a Pilot Project. Shaikh F, Von Reden A, Kolowitz B, et al. Cureus 10(7): e3063. July, 2018. doi:10.7759/cureus.3063.
Translational Radiomics – Defining the strategy pipeline & considerations for application - part I: from Methodology to Clinical implementation. F Shaikh, B Franc, E Allen, E Sala, O Awan, K Hendrata, S Halabi, S Mohiuddin, S Malik, R Shrestha. JACR. 2018.
Translational Radiomics – Defining the strategy pipeline & considerations for application - part II: from Clinical implementation to Enterprise. F Shaikh, B Franc, E Allen, E Sala, O Awan, K Hendrata, S Halabi, S Mohiuddin, S Malik, R Shrestha. JACR. 2018.
Computer-assisted Learning Applications in Health educational informatics - A review. F Shaikh, F Inayat, O Awan, A Choudhry, M Santos, A Waheed, D Kajal. S Tuli. Aug, 2017. Cureus 9(8): e1559. doi:10.7759/cureus.1559.
Molecular Imaging in Genomic Medicine. F Shaikh, F Mulero, S Mohiuddin. Encyclopedia of Life Sciences, Wiley, July 2017.
Technical challenges in Clinical Application of Radiomics - F Shaikh, O Awan, B Kolowitz, A von Reden, H Aerts, S Halabi, S Mohiuddin, S Malik, R Shrestha, C Deible. DOI: 10.1200/CCI.17.00004. JCO Clinical Cancer Informatics - published online May 4, 2017.
Detection of Richter Transformation of Chronic Lymphocytic Leukemia into Diffuse B-cell Lymphoma based on Molecular and PET diagnostics. F Shaikh, F van Gestel, A Farooq, A Ahmad. Jan 2017. Cureus.
Value-based assessment of Radiology Reporting using Radiologist-Referrer Two-way Feedback System - a Design Thinking-based analysis. F Shaikh, K Hendrata, O Awan, B Kolowitz, R Shrestha, C Deible. JDI. Dec 2016.
RSNA Diagnosis Live: A Novel Web Based Audience Response Tool to Promote Evidence Based Learning. O Awan, F Shaikh, E Siegel, P Chang. Radiographics. 2017 Jul-Aug;37(4):1111-1118.
Imaging, Endoscopic and Genetic Assessment of Marfan syndrome presenting with Sigmoid volvulus - A Case Review. F Inayat, A Huraira, F Shaikh. Cureus 8(5): e619. doi:10.7759/cureus.619. May, 2016.
Molecular Imaging in Genetic Medicine - F Shaikh, A Jacob, F Van Gestel, S Yaghoubi. Cureus 8(4): e565. Mar, 2016. doi:10.7759/cureus.565.
Multimodality Imaging for Malignant transformation assessment in Neurofibromatosis type 1 - Editorial. F Shaikh, O Awan. Jan, 2016. Omics J Radiol.
18F-FDG PET/CT imaging of Extranodal Rosai-Dorfman Syndrome with Hepatopancreatic involvement - A Pictorial Review. F Shaikh, O Awan, S Mohiuddin, S Farooqui, S Khan, W McCartney. Cureus. Dec 2015.
Quantitative Imaging Analysis of FDG PET/CT Imaging for Detection of Central Neurolymphomatosis in a Case of Recurrent Diffuse B-Cell Lymphoma. F Shaikh, D Savells, O Awan et al. Cureus 7(11): e379. doi:10.7759/cureus.379. 2015.
Educational Informatics in Academic Medicine & Imaging - F Shaikh. Omics J Radiol. 2015.
Diagnostic yield of FDG PET/CT, MRI, and CSF cytology in nonbiopsiable Neurolymphomatosis as a heralding feature of Diffuse B-cell Lymphoma recurrence. F Shaikh, A Chan, O Awan, N Jerath, C Reddy, S Khan, M Graham. Cureus 7(9): e319. doi:10.7759/cureus.319. 2015.
18F-FDG PET/CT imaging of Gallbladder adenocarcinoma - A pictorial review. F Shaikh, O Awan, S Khan. Cureus 7(8): e298. doi:10.7759/cureus.298. 2015.
Sinonasal NUT midline carcinoma - A Multimodality approach to diagnosis, staging and restaging. F Shaikh, N Pagedar, O Awan, P McNeely. Cureus 7(7): e288. doi:10.7759/cureus.288. 2015.
Multimodality Molecular imaging correlation of a GLUT-1 positive Myopericytic lesion with atypical features. F Shaikh, B Huang, C Buchman, A Sheikh. OMICS Journal of Radiology. 2013 2:111.
Debris-filled Biliary System – A difficult Diagnosis on MRI and MRCP. F Shaikh, M El-azzazi, A Ryan, R Semelka. Clinical Imaging. March 2012.
MR Imaging findings of Rapidly Progressive Hepatocellular Carcinoma. AS Kierans, P Leonardou, P Hayashi, L Brubaker, M El-azzazi, F Shaikh, R Semelka. Mag Reson Imaging. 2010 Apr 26.
Magnetic Resonance imaging of Gallbladder and Biliary system. M Bilgin, F Shaikh, R Semelka, S Bilgin, N Balci, A Erdogan. Top Mag Res Imag. 2009 Feb;20(1):31-42.
MR Imaging findings of Small Bowel Hemorrhage. P Leonardou, A Kierans, M El-azzazi, F Shaikh, R Semelka. J Magn Reson Imaging. 2009 May;29(5):1185-9
MR Imaging: Sequences we use and why. A Kierans, P Leonardou, F Shaikh, R Semelka. Applied Radiology 2009, May; 38(5).
MR Findings of Post-traumatic Intravascular Hepatic Shunts. R Semelka, T Lessa, F Shaikh, F Miller, M El-azzazi. J Magn Reson Imaging 2009, Mar;29(3):617-20.
Utilizing Audience Response to Foster Evidence Based Learning: Does it really work? O Awan, F Dako, T Akhter, S Hava, F Shaikh, S Ali. (AUR Annual meeting 2019).
Microsphere Transarterial Radioembolization (TARE) Treatment - Current Challenges in Prospective Response Assessment, and Future Trends in Optimization Using Next Generation Techniques. F Shaikh, A Sheikh. (presented at Annual SNMMI meeting 2018).
Radiomics - Current challenges in Clinical validation. F Shaikh, O Awan, C Deible, B Kolowitz, K Hendrata, E Allen. (presented at the Annual SIIM meeting 2017).
Machine learning-based approaches in Accelerating and Disseminating Research in Medical Imaging - Challenges & Opportunities. F Shaikh, E Allen, T Harris. JNM/SNMMI. May 2017.
Value-based assessment of Radiology Reporting using Two-way Feedback System. F Shaikh, K Hendrata, E Gatts, D Butolya, R Shrestha, C Deible (presented at the Annual SIIM Meeting 2016).
FDG PET/CT imaging of Gallbladder Adenocarcinoma. F Shaikh, S Bernard, O Awan, A Sheikh. (presented at SNMMI Annual Meeting 2015).
Extraosseous tracer-avid findings on 18F-NaF PET/CT - A Pictorial Review. F Shaikh, Z Cizman, A Sheikh, A Khandani (presented at SNMMI Annual Meeting 2013).
18F-FDG PET/CT imaging of Extranodal Rosai-Dorfman Syndrome with Hepatopancreatic involvement. F Shaikh, S Mohiuddin, K Ali, S Farooqui, W McCartney. (presented at Society of Abdominal Radiology Annual Meeting, 2013).
18F-NaF Bone PET/CT: The Next Level in Musculoskeletal Nuclear Imaging. F Shaikh, A Khandani, J Etten. (presented at RSNA Annual Meeting, 2011).
Radiosynovectomy – our experience with 42 patients with hemophilic arthropathy and pigmented villonodular synovitis. F Shaikh, W McCartney, A Sheikh, E Campion. J Nuc Med 2011; 52 (supplement 1):1385. (presented at SNM Annual Meeting, 2011).
Microsphere Transarterial Radioembolization (TARE) Treatment - Current Challenges in Prospective Response Assessment, and Future Trends in Optimization Using Next Generation Techniques. F Shaikh, A Sheikh. (to be presented at Annual SNMMI meeting 2018).
Chapter: Nuclear Cardiology - Textbook: Netter’s Cardiology - Marschall Runge, et al. 3rd ed (in press), Saunders (2018).
Chapter: Radiomics as applied in Precision medicine - Textbook: Clinical Nuclear Medicine, Biersack, et al. 2nd ed., Springer (2017).
Chapter: Gallbladder and Biliary system - Textbook: Abdominal-pelvic MRI – Richard C. Semelka, MD. 3rd ed., Wiley. (2008).